Insertion junction: CLIP2.074593_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.074593
Chromosome:chromosome 7
Location:1457031
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g323750 HAS2 (1 of 1) K06133 - 4'-phosphopantetheinyl transferase (LYS5, acpT); Holo-[acyl-carrier-protein] synthase 3'UTR
lncRNA_TCONS_00052104 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCATTGATGAGCATTGGCCACACTTGCTCTCTTTGCACAACATCTTA
Internal bar code:AGTTCTGTGAGAGCTTGTATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1900
LEAP-Seq percent confirming:78.8462
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAGGCAACACTGGGGTTT
Suggested primer 2:CTTCCAGGTGAGCCATGGTT