Insertion junction: CLIP2.074598_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.074598
Chromosome:chromosome 6
Location:8504459
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre06.g309100 CPN60C,HSP60 Chaperonin 60C; (1 of 1) PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTAATTAGGCGGCCGGACAAGAATTCAGACGAAGCGGGGAACGTGTG
Internal bar code:CAGCGTCTGCCCGCGAGGAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:155
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCGCTTAGTACATGTCGG
Suggested primer 2:GCGGGAGTGGAAGTTGAAGA