Insertion junction: CLIP2.074599_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.074599
Chromosome:chromosome 13
Location:3220358
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g585450 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTCGGGCAAGGTGTCGGGCAGCACACGCAGCAGCCGAGTCCCTTTCGA
Internal bar code:TTGCGGTTCATGGGAGTTCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:738
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AGCATACAGTTTGAGCCGCT
Suggested primer 2:GGTGTTCCCATACGCTCACA