Insertion junction: CLIP2.074603_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.074603
Chromosome:chromosome 3
Location:8294194
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800396 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGCCTTAGGGGTAATGGGCTGTTGTGACACGTCGGTCAGTTTGACACG
Internal bar code:TAAGCCCTTAGACGTTTCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:805
LEAP-Seq percent confirming:58.8235
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CACACCTTGACGTCCTCCTC
Suggested primer 2:CAGCGTTGACAACACCAAGG