Insertion junction: CLIP2.074606_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.074606
Chromosome:chromosome 1
Location:4985257
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g034550 FAP109 (1 of 2) IPR002048//IPR003117 - EF-hand domain // cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain; EF-Hand Containing Flagellar Associated Protein 109 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTTTGGTCATGCCCACAGACCAGCTCGGTTCATGGACTGGAACCCTGC
Internal bar code:TATAAGCGGTGCGTACTTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:570
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTCCGACAGCGCTTTAAA
Suggested primer 2:CCGGAAAACCAAGTTGCTGG