Insertion junction: CLIP2.074608_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.074608
Chromosome:chromosome 1
Location:1573195
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g008500 (1 of 2) PF12796//PF13857 - Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATGTATGTGTGTGTGTTTCGTGCCGATGCACGGCCCGTGTAAGAGACC
Internal bar code:GTAAGCCAGGGCCGGTCCTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:187
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACCCATCCCTCACTTCC
Suggested primer 2:GCTTTCTCAGTGCCCCTCAT