Insertion junction: CLIP2.074617_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.074617
Chromosome:chromosome 2
Location:5673769
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g116050 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGTGCGAGTGCAACTTGCACCTAGTGAGCTTCGTAATTTGCTGCAGA
Internal bar code:TACGGTCATTTTTTTTTGTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1211
LEAP-Seq percent confirming:11.7647
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:60
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:TTCACACTCATCCGCGTTCA
Suggested primer 2:AACAGCGTGAACACATGCAC