Insertion junction: CLIP2.074624_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074624
Chromosome:chromosome 14
Location:136316
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g608452 (1 of 1) K11366 - ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] (USP22_27_51, UBP8) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCAATCAACACGTGCACCCTCAGCCCCACGCCCTGCTAGCGCCGTTC
Internal bar code:TATTATCCCTCCGCCAGTTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1451
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGGACAGAACAGTTCCAA
Suggested primer 2:CGCGATCATTCCGTGGAGTA