Insertion junction: CLIP2.074625_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.074625
Chromosome:chromosome 16
Location:2409451
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g659700 3'UTR
Cre16.g659750 CEP15 Cysteine endopeptidase; (1 of 3) 3.4.18.1 - Cathepsin X / Lysosomal carboxypeptidase B 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTTGGTGTGACGCATTGCTCTGACTGGTGTTACATGGCAAGGAATGCA
Internal bar code:CTGTTTGTGCGCAAGGGTACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3554
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGCTGACGTTTCCTGTCT
Suggested primer 2:CAAGTGAGTTTTGGGGCGTG