Insertion junction: CLIP2.074627_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.074627
Chromosome:chromosome 11
Location:2442991
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095119 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACCTGAGCCGCCCAAGCACGAACAGCCAAGACGTCAACCGCTAGTGA
Internal bar code:GGGACAGGCCAGCGCAGGACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2068
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGAGAGAGTGAGGCAGA
Suggested primer 2:GCATGCGTGTGTGTTTGTCT