Insertion junction: CLIP2.074628_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074628
Chromosome:chromosome 2
Location:7160371
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390356 (1 of 1) PTHR22849//PTHR22849:SF0 - WDSAM1 PROTEIN // WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1 intron
Cre09.g390393 (1 of 5) PF01713 - Smr domain (Smr) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCTGCGCACAATAGACCGTGTACATGACTGGGTGGTGTGCCGTTGTGG
Internal bar code:TATTTCAGGTGTCTTGCTGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4146
LEAP-Seq percent confirming:83.871
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCACAAACGGAAGCACT
Suggested primer 2:CTGGTTTGCCTATTTCCGCG