Insertion junction: CLIP2.074636_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.074636
Chromosome:chromosome 3
Location:1143331
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g149001 3'UTR
Cre03.g149050 (1 of 1) PF03188//PF13415 - Eukaryotic cytochrome b561 (Cytochrom_B561) // Galactose oxidase, central domain (Kelch_3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTCAACACATTGCTTCGGCGTGTGGGGACGCCACGTTGGCGAGAGCCA
Internal bar code:AGGTAGTCGGCGTGTATCCATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2226
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTCAGTTCCGCTTCACGT
Suggested primer 2:TCTGCTGAAGCTGGAACCAG