Insertion junction: CLIP2.074636_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.074636
Chromosome:chromosome 3
Location:1143336
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g149001 3'UTR
Cre03.g149050 (1 of 1) PF03188//PF13415 - Eukaryotic cytochrome b561 (Cytochrom_B561) // Galactose oxidase, central domain (Kelch_3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGGACAGACGACCACTCAGGACGGCGTAAGAGGGCGGGGCGTGGGCGC
Internal bar code:GCATTCCGTAAACAATGTATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5519
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGCTGAAGCTGGAACCAG
Suggested primer 2:ATGTCAGTTCCGCTTCACGT