Insertion junction: CLIP2.074637_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074637
Chromosome:chromosome 16
Location:5825256
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre16.g679900 XRN3 5' to 3' exoribonuclease; (1 of 1) K12619 - 5'-3' exoribonuclease 2 (XRN2, RAT1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGAGGGCCGTAAGTGTGAATGCTGGAGGTGTGGAGAGGCAGAGGGAG
Internal bar code:GCTAGCTGAAAACGTTTGGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:604
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAACACTTCAGTCGCCAG
Suggested primer 2:CCTACACAGACCACACGACC