Insertion junction: CLIP2.074639_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074639
Chromosome:plastome
Location:128269
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802317 atpH,ChreCp053,2717044 ATPase III subunit; (1 of 1) K02110 - F-type H+-transporting ATPase subunit c (ATPF0C, atpE) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGTTGAAGGTATTGCTCGTCAACCTGAAGCTGAAGGTAAAATCCGTG
Internal bar code:ATGAGGTTCTTCGGTGCACGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:159
LEAP-Seq percent confirming:35.2941
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGAAGCACCAAAGGCAGT
Suggested primer 2:CCTTCCGCAGAGGGTGAAAT