Insertion junction: CLIP2.074645_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.074645
Chromosome:chromosome 12
Location:2878977
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g502900 (1 of 3) 3.4.24.13 - IgA-specific metalloendopeptidase / Immunoglobulin A1 proteinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATGAAACAGCGCAATCCGGCAAAACGGCAATCGCTCGGTCAGTCTCAA
Internal bar code:GCAATCGCAAGGCTTACCTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:862
LEAP-Seq percent confirming:65.3846
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGCTACGATACCCTGCAG
Suggested primer 2:GCGGTCACTATGATGCGGTA