Insertion junction: CLIP2.074650_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.074650
Chromosome:chromosome 16
Location:636246
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691850 COX90 Mitochondrial cytochrome c oxidase subunit 3'UTR
Cre16.g691900 PUS19 RNA pseudouridine synthase; (1 of 1) PTHR11142:SF9 - TRNA PSEUDOURIDINE SYNTHASE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCATTACCTGTCGGTTGCCTTAGGCCTTAATGAGCCATGTGATGACC
Internal bar code:TAAGCTGTTTCGTGGTAAATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3375
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGTTGGCAAATGCACTC
Suggested primer 2:CTGAGATGCTGTGTCGTGGT