Insertion junction: CLIP2.074660_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074660
Chromosome:chromosome 2
Location:4892526
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g109750 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCCGGGCGGCCGTGGCCATGTTGGGCTAGGCAATCGGTGATTTAGGTG
Internal bar code:ATGGACTAGGAATTGGTCTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4199
LEAP-Seq percent confirming:88.3117
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCCTATCCGACTTCCGTG
Suggested primer 2:AAACGTGTGGCACATTCTGC