Insertion junction: CLIP2.074687_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.074687
Chromosome:chromosome 17
Location:4545236
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802095 (1 of 14) PF02493 - MORN repeat (MORN) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCCGTGCATAGCCTCGATTGTAGCATGCACATACAGTAAACGTCAGT
Internal bar code:CCTCATTTTAGCTTGTTCTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:367
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AAACCCCTGTTTGCCCTTGA
Suggested primer 2:CGCGAGTAAACAATCCGCTG