Insertion junction: CLIP2.074687_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.074687
Chromosome:chromosome 17
Location:4545237
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802095 (1 of 14) PF02493 - MORN repeat (MORN) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAAAGTGAGTTCACCGAGCTCGCGAGCCCTTGTCAATGTGGCATGTGA
Internal bar code:CCTCATTTTAGCTTGTTCTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2313
LEAP-Seq percent confirming:80.303
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGAGTAAACAATCCGCTG
Suggested primer 2:AAACCCCTGTTTGCCCTTGA