Insertion junction: CLIP2.074695_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074695
Chromosome:chromosome 16
Location:4025848
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g690000 HPAT2,CGL147 Hydroxyproline O-arabinosyl transferase 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACGCAGGCAAGCCCGACGACCTGATGGACGAGATCCCCACCGTGGTG
Internal bar code:TGCTTATCTACCATAGGTAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:205
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTATTTCTGCGGGGGTGG
Suggested primer 2:TTCTTCGGCTACAGCGTGTT