Insertion junction: CLIP2.074696_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074696
Chromosome:chromosome 17
Location:2647733
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716800 XUV7 Xanthine/uracil/vitamin C permease-like, sodium-dependent 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCAGGCCCACCAAAGCAGCACCACGCAGTCACAGCACTGGCACGCTA
Internal bar code:GACGGTTTGAATCAGGTCTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2889
LEAP-Seq percent confirming:81.5217
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAGATTGTGCCGGGAAGG
Suggested primer 2:CTTCGGTTGTGCCTTTGTGG