Insertion junction: CLIP2.074699_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.074699
Chromosome:plastome
Location:124229
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802314 2717041,ChreCp050,atpA (1 of 1) K02111 - F-type H+-transporting ATPase subunit alpha (ATPF1A, atpA); ATP synthase CF1 alpha chain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCACCTAATAATACCGCACCTACGTTGTTTGCTTCTAAGTTAAGTGCA
Internal bar code:TTCAAACGTCGTGAAGAGGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:414
LEAP-Seq percent confirming:7.14286
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTGTCAGGGGATAAGCGA
Suggested primer 2:GAGCTGCAGAACCTACACGT