Insertion junction: CLIP2.074704_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.074704
Chromosome:chromosome 6
Location:7124598
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g297950 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCCATCAACTTTGCAGGTGGTTACCTGCACTGCATCAGTCATTGACCG
Internal bar code:TTAGATGGAACATATCCAAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3217
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:131
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:131

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCCCCTATTTGTCCCGCC
Suggested primer 2:CACCTAGGCGCCAAGGATAG