Insertion junction: CLIP2.074710_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074710
Chromosome:chromosome 17
Location:3339225
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g722750 CTAP4 Chloroplast translocon associated protein 4 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTGCGGGAGCGCCATAGGATGCCGGGAGGCGCACCCCTGTGGAGGCTG
Internal bar code:ATTATCAGCACACAAAGGCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3058
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGATCCGAAGTCCTTCCG
Suggested primer 2:TAGGGATGGGAGCAAGTGGA