Insertion junction: CLIP2.074712_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.074712
Chromosome:chromosome 10
Location:4145528
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g448750 GT90F21,GT90-21 (1 of 11) 2.4.2.26 - Protein xylosyltransferase / Uridine diphosphoxylose-protein xylosyltransferase; GT90 family protein 21 3'UTR
Cre10.g448800 (1 of 1) PF09186 - Domain of unknown function (DUF1949) (DUF1949) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCGACACTCAGATATGGATTGAGAGGAGCAGCTATGAGAATTAAAGG
Internal bar code:GCTGTCATTGCACCATGAATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3286
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTGTGCTCTCCTCTCTGA
Suggested primer 2:TCATGGCCTGCAGTTGATGT