Insertion junction: CLIP2.074716_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.074716
Chromosome:chromosome 9
Location:2737397
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391450 HCP1 (1 of 4) 1.7.99.1 - Hydroxylamine reductase / Hydroxylamine (acceptor) reductase; Hybrid-cluster protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACCAGCGCCCCTTCGACCCCAAATCCCCGTCACATGCGCGGGAAGCAT
Internal bar code:GCGCTGATCGGAAGTGTTCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:898
LEAP-Seq percent confirming:84.2105
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CACAGCGCTCAATACGAAGC
Suggested primer 2:CTGCGAAGTTGACGTTGGTG