Insertion junction: CLIP2.074719_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.074719
Chromosome:chromosome 2
Location:4284655
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre02.g104800 HTV1 (1 of 35) IPR000164//IPR007125//IPR009072 - Histone H3/CENP-A // Histone H2A/H2B/H3 // Histone-fold; Histone H3 variant intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTTGCTCATTGCTCTACATGCTAGCCACTGCATGCGCCTCCCCCCCCC
Internal bar code:GATGTATTCCCTCTATAATGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:594
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGAAATCCACGGAGCTG
Suggested primer 2:TGCAGCACACAATTGTCTGC