Insertion junction: CLIP2.074730_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.074730
Chromosome:chromosome 5
Location:1422511
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234641 (1 of 4) IPR023798 - Ribosomal protein S7 domain 3'UTR
lncRNA_TCONS_00213942 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGTCCCTGGCTCAGGTCCTGACCGCCTGCTAACCTTCCTGCTGCGTCC
Internal bar code:TTATTTACCCGTTGATGAAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3166
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCTCTGCATCCATCTCCA
Suggested primer 2:TCGTACGGCTTTTCAGGCAT