Insertion junction: CLIP2.074737_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074737
Chromosome:chromosome 7
Location:2352258
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g328250 Pumilio-family RNA binding protein; (1 of 2) K17943 - pumilio RNA-binding family (PUM) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGGCGCGCCACCCCTACGGCTGCCGACTGGTGCAGTCGCTGCTGCAG
Internal bar code:TTGACGGTTTAGGTTGTATACC

Confirmation - LEAP-Seq

LEAP-Seq distance:103
LEAP-Seq percent confirming:13.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAGATGCAAGGGGTATGT
Suggested primer 2:GCCCACGATACTGTTCCCAA