Insertion junction: CLIP2.074742_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.074742
Chromosome:chromosome 6
Location:5539275
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g286900 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGAAATGGCACTCCACCTTTCCAATTGTCTGCGTGGCGTGGCATCACG
Internal bar code:GGAATTGTGCGGGGCACTCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2539
LEAP-Seq percent confirming:90.625
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CATGAATTGCTCAGCGGACG
Suggested primer 2:TCGGTTGCAATTTGCCCATG