Insertion junction: CLIP2.074743_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.074743
Chromosome:chromosome 7
Location:4645117
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344600 PGD1,PGDH1 (1 of 1) PTHR10996:SF159 - D-3-PHOSPHOGLYCERATE DEHYDROGENASE; D-3-phosphoglycerate dehydrogenase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTAAAAATGTTGCACTTGACAAATTACAGGGTCTGCTCTCGCTTCGTG
Internal bar code:GTGAGAGGCCAGTGTACACTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1506
LEAP-Seq percent confirming:90.2439
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGGGCGTTAAATTGAGGG
Suggested primer 2:TGATTCCAGACCCCAACTGC