Insertion junction: CLIP2.074752_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074752
Chromosome:chromosome 2
Location:7537863
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392914 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTGAAATAAGCCCCGAAAGCGTCCTGGGGACGAGAAGTTGGCAACCCG
Internal bar code:CTGTCGCCGCAAAATAAATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:308
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAGTCGGATCGCTACCAG
Suggested primer 2:AACAAGGTAGACTGTGCGGG