Insertion junction: CLIP2.074766_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.074766
Chromosome:chromosome 10
Location:4724324
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g452450 TIC110 Chloroplast envelope protein; (1 of 1) PF16940 - Chloroplast envelope transporter (Tic110) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGAAGCTGCGTACGGTGTGCGTGCTGGGGCAGCGTTAGCAATTGCGGC
Internal bar code:GGGGATAATCCTTTAGGGCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1965
LEAP-Seq percent confirming:81.5789
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCTGTGCGCTGTAACAC
Suggested primer 2:TACACCCATCCCCTCCTCTG