Insertion junction: CLIP2.074766_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.074766
Chromosome:chromosome 10
Location:4724325
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g452450 TIC110 Chloroplast envelope protein; (1 of 1) PF16940 - Chloroplast envelope transporter (Tic110) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCAACAAACCAAAACGCGCACACGAGTTATGTTTTCCCGCTGTTGTC
Internal bar code:GGGGATAATCCTTTAGGGCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:107
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TACACCCATCCCCTCCTCTG
Suggested primer 2:TTTGCTGTGCGCTGTAACAC