Insertion junction: CLIP2.074774_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074774
Chromosome:chromosome 6
Location:4961011
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g281286 5'UTR
Cre06.g800694 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGAAATGATCTGACCCTGTCAGTCCCGTGCAACTGCAGCCCCTCAAT
Internal bar code:TTATAATGTTGTCATGAGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2435
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGGCATTTTAGCTGGCGC
Suggested primer 2:CACACGTGCACCTCAAACAG