Insertion junction: CLIP2.074786_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.074786
Chromosome:chromosome 3
Location:6017011
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189650 (1 of 1) K04498 - E1A/CREB-binding protein (EP300, CREBBP, KAT3); Histone acetyltransferase 5'UTR
Cre03.g189700 (1 of 2) K07735 - putative transcriptional regulator (algH) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGACCGCATATATCGTGCTTCTGACTAGTCGTACGTAGCAATGGATTA
Internal bar code:GATTTTTACAAAGTACGAACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3452
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TACCGTTCTGGAACTGTGCC
Suggested primer 2:ACGCTCGCTCCTCATACATG