Insertion junction: CLIP2.074791_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.074791
Chromosome:chromosome 9
Location:844466
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g403650 (1 of 9) IPR000719//IPR002290//IPR011009//IPR020635//IPR027916 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // Protein kinase-like domain, Apicomplexa intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAACGTGCGCTGTGCTGTTGGGTGCCCATCGCTCGTCCGGACGAGGCCTG
Internal bar code:AGTACCCTTCTCTTCGGTAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1764
LEAP-Seq percent confirming:6.25
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:45
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAATGTGGGCAGCTTTTG
Suggested primer 2:GTTCACGTTGCTGTGTCACC