Insertion junction: CLIP2.074800_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.074800
Chromosome:chromosome 3
Location:6435087
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193050 3'UTR
Cre03.g193100 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCACAACACACACAGTTCGAAACCGGCTACGGTACTCCACACAACGCA
Internal bar code:TGAGGATTAAATGGCTCGCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4972
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGCGCTTCATGTACGTGT
Suggested primer 2:TACTGTGCACACGGAATGCT