Insertion junction: CLIP2.074814_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.074814
Chromosome:chromosome 11
Location:386649
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre11.g467581 (1 of 1) PTHR10071:SF177 - GATA-LIKE TRANSCRIPTION FACTOR ELT-6 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGCCCATACCGCCGTAGCCCATCATGCTCATCATCCACATCTGCCAC
Internal bar code:GAGATCATTGTTACCAGAGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:579
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCAGCGCCATGAACATG
Suggested primer 2:GGTGCTGTTGGTGTTGTTGG