Insertion junction: CLIP2.074822_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.074822
Chromosome:chromosome 7
Location:1697053
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325711 (1 of 2) K19363 - lipopolysaccharide-induced tumor necrosis factor-alpha factor (LITAF) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGGGACACCCTGGCGCGCCTTTGGCAGGAGGTAAGCTGGGAACGGCGA
Internal bar code:GTATCTCTGATGTTAGGATCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1592
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTCTGAATTTCCAGGGCT
Suggested primer 2:AGCAACGAGGTGGACATCAG