Insertion junction: CLIP2.074824_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074824
Chromosome:chromosome 4
Location:2050810
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g219250 IFT52,BLD1 Intraflagellar transport protein 52; (1 of 1) PF09822 - ABC-type uncharacterized transport system (ABC_transp_aux) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGGTGAACGATGGATTATGGATATCGGAGTGCACAGAGGCTGACAAG
Internal bar code:TAATCAGAAAAGAGGGCATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1600
LEAP-Seq percent confirming:30.2326
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTCCAGTCGAGTGTTGCC
Suggested primer 2:GCATCGCGCAGTACAAGATG