Insertion junction: CLIP2.074825_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.074825
Chromosome:chromosome 13
Location:2597963
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580700 DAL2 allantoate deiminase; (1 of 1) 3.5.3.9 - Allantoate deiminase 3'UTR
Cre13.g580750 (1 of 1) K16274 - E3 ubiquitin-protein ligase AIP2 [EC:6.3.2.19] (AIP2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCACCCGGATGAGATGATGGCACGGCCGGCACCAGCGCATTTCTCAGC
Internal bar code:ACCATTTGAAGTTTCGGTTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1426
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGTAATGGGCGTCAATGC
Suggested primer 2:CGCGAGAGTATGTTACGGCT