Insertion junction: CLIP2.074840_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.074840
Chromosome:chromosome 9
Location:3828145
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g397771 OPR117 OctotricoPeptide Repeat protein 117 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGGTGGGGCGGGGAAATGGTGATGCGGGCTCGGCCGGAACGGGTCCCA
Internal bar code:CTAAGTTTTTGTGTAGTGTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:971
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCGATCTAGGAGTTCCGGTG
Suggested primer 2:TAGATGGGCAATGCTCCTGC