Insertion junction: CLIP2.074856_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074856
Chromosome:chromosome 6
Location:3136213
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275550 RWP2 (1 of 1) IPR003035//IPR003072 - RWP-RK domain // Orphan nuclear receptor, NOR1 type; RWP-RK transcription factor 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCCAGTCCCGCTTCGCCAGAGGTGGCGCTTCAGGTCTGAAGCGGGCTA
Internal bar code:TAGTGTCGTGGTGGCGCGAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2148
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGTTATTGAAGGGTCGCA
Suggested primer 2:CTGTTTGGGAAGCCACGTTG