Insertion junction: CLIP2.074857_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.074857
Chromosome:chromosome 4
Location:3059441
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre04.g225250 (1 of 3) PF14494 - Domain of unknown function (DUF4436) (DUF4436) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACCGAGCCCGGCACGCACCTACGCGGTCGCCCTGGGACAGAGTCACC
Internal bar code:TGGCAGAGTGGTGAGTGACCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:679
LEAP-Seq percent confirming:31.5789
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTCCCACACATCCCTATC
Suggested primer 2:ATGCGTGTGAATATGCGTGC