Insertion junction: CLIP2.074859_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.074859
Chromosome:chromosome 3
Location:6413893
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g192850 (1 of 1) 2.3.1.193 - tRNA(Met) cytidine acetyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACCACAGTCCGCGGCTCTGGGCCTGGCCATTGCGGGCGCCCTCGCCCT
Internal bar code:TAACGAAAAGGAACACGTTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:634
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTGTAGAACGCGCGTTTC
Suggested primer 2:TAGCAACCCCTAGCAAGTGC