Insertion junction: CLIP2.074863_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074863
Chromosome:chromosome 3
Location:870908
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146447 (1 of 1) PTHR23244//PTHR23244:SF253 - KELCH REPEAT DOMAIN // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGATGCAGACTCCCAGACTCCTTGCGCACACACACACCCGCTCCTTGC
Internal bar code:CGTTTAGTAGAGGACTATAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:945
LEAP-Seq percent confirming:18.5185
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TCCATTTGCAGCTGTTTCGC
Suggested primer 2:CAAGCGGCAAAACGTGAGAA