Insertion junction: CLIP2.074865_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.074865
Chromosome:chromosome 6
Location:3014247
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g274450 SMM20 (1 of 5) PTHR13271//PTHR13271:SF28 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // SUBFAMILY NOT NAMED; S-adenosyl-L-methionine-dependent methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCACAGGCAGCCACACACTTAATTCCGCCCTCATCAACTGCCCCTCGTT
Internal bar code:GTAGATCAGGTAGTAGGTGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1559
LEAP-Seq percent confirming:45.2991
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:64
LEAP-Seq n unique pos:117

Suggested primers for confirmation by PCR

Suggested primer 1:CATATCACTGGGTCGCCCTC
Suggested primer 2:TCGCCAACCTCCTCTCCATA