Insertion junction: CLIP2.074867_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.074867
Chromosome:chromosome 16
Location:4036399
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g690150 ALG6,GTR21 (1 of 1) 2.4.1.267 - Dolichyl-P-Glc:Man(9)GlcNAc(2)-PP-dolichol alpha-1,3-glucosyltransferase / Dol-P-Glc:Man(9)GlcNAc(2)-PP-Dol alpha-1->3-glucosyltransferase; Alpha-1%252C3-glucosyltransferase 6 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAACCTCTTCACTCGTCTTTTAAACGCCGCGCGGCACGCTGCTTCGCC
Internal bar code:TATACGGGGCTTTCGGTTGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:873
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTGCACGAGAAGTCCAT
Suggested primer 2:GAAAGCATTGTGGCCGTTGT